SuperSCC
Overview
Installation
Bonus for R person
API
Tutorial
Feature selection
Label transfer
Clustering
Gene module detection and evaluation
Retrival augment generation (RAG)
SuperSCC
Index
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Index
_
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A
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C
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F
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G
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M
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P
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R
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S
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U
_
__init__() (SuperSCC.rag.ConnectRAG method)
(SuperSCC.rag.SimpleRAG method)
A
analyse_one_gene_module() (in module SuperSCC.gene_module)
C
compare_gene_modules() (in module SuperSCC.gene_module)
connect_client() (SuperSCC.rag.ConnectRAG method)
ConnectRAG (class in SuperSCC.rag)
F
feature_selection() (in module SuperSCC)
(in module SuperSCC.feature_selection)
find_markers_ovr() (in module SuperSCC.feature_selection)
find_signature_genes() (in module SuperSCC.feature_selection)
G
get_answer() (SuperSCC.rag.SimpleRAG method)
get_gene_module() (in module SuperSCC.gene_module)
global_consensus_cluster() (in module SuperSCC.clustering)
M
model_training() (in module SuperSCC.label_transfer)
module
SuperSCC
P
predict_label() (in module SuperSCC.label_transfer)
R
run_rag() (SuperSCC.rag.ConnectRAG method)
(SuperSCC.rag.SimpleRAG method)
S
SimpleRAG (class in SuperSCC.rag)
sub_consensus_cluster() (in module SuperSCC.clustering)
SuperSCC
module
U
update_rag_chain() (SuperSCC.rag.SimpleRAG method)