SuperSCC

Overview

  • Installation
  • Bonus for R person
  • API

Tutorial

  • Feature selection
  • Label transfer
  • Clustering
  • Gene module detection and evaluation
  • Retrival augment generation (RAG)
SuperSCC
  • Index
  • Edit on GitHub

Index

_ | A | C | F | G | M | P | R | S | U

_

  • __init__() (SuperSCC.rag.ConnectRAG method)
    • (SuperSCC.rag.SimpleRAG method)

A

  • analyse_one_gene_module() (in module SuperSCC.gene_module)

C

  • compare_gene_modules() (in module SuperSCC.gene_module)
  • connect_client() (SuperSCC.rag.ConnectRAG method)
  • ConnectRAG (class in SuperSCC.rag)

F

  • feature_selection() (in module SuperSCC)
    • (in module SuperSCC.feature_selection)
  • find_markers_ovr() (in module SuperSCC.feature_selection)
  • find_signature_genes() (in module SuperSCC.feature_selection)

G

  • get_answer() (SuperSCC.rag.SimpleRAG method)
  • get_gene_module() (in module SuperSCC.gene_module)
  • global_consensus_cluster() (in module SuperSCC.clustering)

M

  • model_training() (in module SuperSCC.label_transfer)
  • module
    • SuperSCC

P

  • predict_label() (in module SuperSCC.label_transfer)

R

  • run_rag() (SuperSCC.rag.ConnectRAG method)
    • (SuperSCC.rag.SimpleRAG method)

S

  • SimpleRAG (class in SuperSCC.rag)
  • sub_consensus_cluster() (in module SuperSCC.clustering)
  • SuperSCC
    • module

U

  • update_rag_chain() (SuperSCC.rag.SimpleRAG method)

© Copyright 2025, Feng Tang.

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